Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDR1Q08345 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.34■□□□□ 0.85
DDR1Q08345 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.34■□□□□ 0.85
DDR1Q08345 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.34■□□□□ 0.85
DDR1Q08345 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.34■□□□□ 0.85
DDR1Q08345 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDR1Q08345 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDR1Q08345 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
DDR1Q08345 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DDR1Q08345 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.34■□□□□ 0.85
DDR1Q08345 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDR1Q08345 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.34■□□□□ 0.85
DDR1Q08345 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.33■□□□□ 0.85
DDR1Q08345 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.33■□□□□ 0.85
DDR1Q08345 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.33■□□□□ 0.85
DDR1Q08345 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
DDR1Q08345 KRT43P-201ENST00000434019 910 ntBASIC20.33■□□□□ 0.85
DDR1Q08345 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.33■□□□□ 0.85
DDR1Q08345 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.33■□□□□ 0.85
DDR1Q08345 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.33■□□□□ 0.85
DDR1Q08345 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.33■□□□□ 0.85
DDR1Q08345 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.33■□□□□ 0.85
DDR1Q08345 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 SLC25A47P1-201ENST00000531577 414 ntBASIC20.33■□□□□ 0.85
DDR1Q08345 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.33■□□□□ 0.85
DDR1Q08345 RN7SL219P-201ENST00000582872 296 ntBASIC20.33■□□□□ 0.85
DDR1Q08345 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.33■□□□□ 0.85
DDR1Q08345 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDR1Q08345 AC005332.8-201ENST00000622750 2735 ntBASIC20.33■□□□□ 0.85
DDR1Q08345 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDR1Q08345 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DDR1Q08345 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDR1Q08345 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.33■□□□□ 0.84
DDR1Q08345 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
DDR1Q08345 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.32■□□□□ 0.84
DDR1Q08345 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.32■□□□□ 0.84
DDR1Q08345 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.32■□□□□ 0.84
DDR1Q08345 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.32■□□□□ 0.84
DDR1Q08345 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDR1Q08345 TIMM17BP1-201ENST00000545713 516 ntBASIC20.32■□□□□ 0.84
DDR1Q08345 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.32■□□□□ 0.84
DDR1Q08345 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.32■□□□□ 0.84
DDR1Q08345 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.32■□□□□ 0.84
DDR1Q08345 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DDR1Q08345 AL136982.4-201ENST00000437689 1740 ntBASIC20.32■□□□□ 0.84
DDR1Q08345 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDR1Q08345 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DDR1Q08345 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DDR1Q08345 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.31■□□□□ 0.84
DDR1Q08345 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.31■□□□□ 0.84
DDR1Q08345 AC104596.2-201ENST00000512793 793 ntBASIC20.31■□□□□ 0.84
DDR1Q08345 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.31■□□□□ 0.84
DDR1Q08345 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.31■□□□□ 0.84
DDR1Q08345 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.31■□□□□ 0.84
DDR1Q08345 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.31■□□□□ 0.84
DDR1Q08345 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.31■□□□□ 0.84
DDR1Q08345 MIR5189-201ENST00000577370 114 ntBASIC20.31■□□□□ 0.84
DDR1Q08345 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.31■□□□□ 0.84
DDR1Q08345 AC020765.3-201ENST00000613051 740 ntBASIC20.31■□□□□ 0.84
DDR1Q08345 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.31■□□□□ 0.84
DDR1Q08345 AL139011.1-202ENST00000642063 584 ntBASIC20.31■□□□□ 0.84
DDR1Q08345 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.31■□□□□ 0.84
DDR1Q08345 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDR1Q08345 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DDR1Q08345 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms