Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ASIC1P78348 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ASIC1P78348 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ASIC1P78348 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 AC104109.2-201ENST00000602919 1418 ntBASIC18.53■□□□□ 0.56
ASIC1P78348 PCGF3-213ENST00000620529 1899 ntBASIC18.53■□□□□ 0.56
ASIC1P78348 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.53■□□□□ 0.56
ASIC1P78348 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ASIC1P78348 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ASIC1P78348 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.52■□□□□ 0.56
ASIC1P78348 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
ASIC1P78348 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.52■□□□□ 0.56
ASIC1P78348 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ASIC1P78348 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.52■□□□□ 0.56
ASIC1P78348 HMGA1P7-201ENST00000406908 502 ntBASIC18.52■□□□□ 0.56
ASIC1P78348 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ASIC1P78348 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.52■□□□□ 0.56
ASIC1P78348 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.52■□□□□ 0.56
ASIC1P78348 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ASIC1P78348 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.52■□□□□ 0.56
ASIC1P78348 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ASIC1P78348 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.52■□□□□ 0.56
ASIC1P78348 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ASIC1P78348 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ASIC1P78348 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ASIC1P78348 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ASIC1P78348 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ASIC1P78348 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ASIC1P78348 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ASIC1P78348 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ASIC1P78348 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.51■□□□□ 0.55
ASIC1P78348 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ASIC1P78348 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 AL031432.2-201ENST00000566714 459 ntBASIC18.51■□□□□ 0.55
ASIC1P78348 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.51■□□□□ 0.55
ASIC1P78348 AL928711.1-201ENST00000570165 459 ntBASIC18.51■□□□□ 0.55
ASIC1P78348 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 AL645728.2-201ENST00000641974 660 ntBASIC18.51■□□□□ 0.55
ASIC1P78348 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms