Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC087499.6-201ENST00000411576 835 ntBASIC15.72■□□□□ 0.11
GABREP78334 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GABREP78334 DFFBP1-201ENST00000433250 979 ntBASIC15.72■□□□□ 0.11
GABREP78334 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 GNAQP1-201ENST00000444815 1067 ntBASIC15.72■□□□□ 0.11
GABREP78334 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.72■□□□□ 0.11
GABREP78334 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
GABREP78334 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.72■□□□□ 0.11
GABREP78334 AC104794.3-201ENST00000566840 1248 ntBASIC15.72■□□□□ 0.11
GABREP78334 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.72■□□□□ 0.11
GABREP78334 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GABREP78334 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.72■□□□□ 0.11
GABREP78334 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GABREP78334 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.71■□□□□ 0.11
GABREP78334 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
GABREP78334 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
GABREP78334 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.71■□□□□ 0.11
GABREP78334 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 AL512384.1-201ENST00000406683 331 ntBASIC15.71■□□□□ 0.11
GABREP78334 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.71■□□□□ 0.11
GABREP78334 AC011495.1-201ENST00000498085 584 ntBASIC15.71■□□□□ 0.11
GABREP78334 RNA5SP410-201ENST00000516285 106 ntBASIC15.71■□□□□ 0.11
GABREP78334 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
GABREP78334 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 AC105021.1-202ENST00000570572 669 ntBASIC15.71■□□□□ 0.11
GABREP78334 MIR4492-201ENST00000581627 80 ntBASIC15.71■□□□□ 0.11
GABREP78334 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 MIR6799-201ENST00000620297 69 ntBASIC15.71■□□□□ 0.11
GABREP78334 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GABREP78334 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.71■□□□□ 0.11
GABREP78334 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GABREP78334 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.71■□□□□ 0.1
GABREP78334 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GABREP78334 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
GABREP78334 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.71■□□□□ 0.1
GABREP78334 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GABREP78334 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.7■□□□□ 0.1
GABREP78334 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GABREP78334 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GABREP78334 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
GABREP78334 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
GABREP78334 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GABREP78334 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
GABREP78334 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.7■□□□□ 0.1
GABREP78334 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.7■□□□□ 0.1
GABREP78334 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.7■□□□□ 0.1
GABREP78334 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.7■□□□□ 0.1
GABREP78334 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.7■□□□□ 0.1
GABREP78334 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.7■□□□□ 0.1
GABREP78334 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.7■□□□□ 0.1
GABREP78334 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.7■□□□□ 0.1
GABREP78334 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GABREP78334 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABREP78334 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.7■□□□□ 0.1
GABREP78334 AL391825.1-201ENST00000457671 1364 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms