Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC105233.2-201ENST00000523697 349 ntBASIC16.67■□□□□ 0.26
AP1S1P61966 AF228730.5-201ENST00000530288 346 ntBASIC16.67■□□□□ 0.26
AP1S1P61966 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.67■□□□□ 0.26
AP1S1P61966 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 AC027307.2-201ENST00000591252 911 ntBASIC16.67■□□□□ 0.26
AP1S1P61966 AC073389.1-201ENST00000595595 795 ntBASIC16.67■□□□□ 0.26
AP1S1P61966 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.67■□□□□ 0.26
AP1S1P61966 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
AP1S1P61966 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
AP1S1P61966 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.66■□□□□ 0.26
AP1S1P61966 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.66■□□□□ 0.26
AP1S1P61966 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.66■□□□□ 0.26
AP1S1P61966 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP1S1P61966 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.66■□□□□ 0.26
AP1S1P61966 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
AP1S1P61966 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
AP1S1P61966 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.66■□□□□ 0.26
AP1S1P61966 POU5F1P6-201ENST00000466990 990 ntBASIC16.66■□□□□ 0.26
AP1S1P61966 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.66■□□□□ 0.26
AP1S1P61966 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.66■□□□□ 0.26
AP1S1P61966 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.66■□□□□ 0.26
AP1S1P61966 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AP1S1P61966 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 LINC01225-203ENST00000563550 1244 ntBASIC16.66■□□□□ 0.26
AP1S1P61966 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.66■□□□□ 0.26
AP1S1P61966 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
AP1S1P61966 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.66■□□□□ 0.26
AP1S1P61966 AC092171.3-201ENST00000610122 2651 ntBASIC16.66■□□□□ 0.26
AP1S1P61966 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AP1S1P61966 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S1P61966 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.65■□□□□ 0.26
AP1S1P61966 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.65■□□□□ 0.26
AP1S1P61966 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AP1S1P61966 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.65■□□□□ 0.26
AP1S1P61966 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
AP1S1P61966 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 AC005237.2-201ENST00000434368 219 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 AC069335.1-201ENST00000489972 472 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.65■□□□□ 0.26
AP1S1P61966 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.65■□□□□ 0.26
AP1S1P61966 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
AP1S1P61966 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.65■□□□□ 0.26
AP1S1P61966 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.65■□□□□ 0.26
AP1S1P61966 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.65■□□□□ 0.26
AP1S1P61966 AL138918.1-201ENST00000568306 659 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
AP1S1P61966 AP001160.2-201ENST00000596071 487 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 AL596442.2-201ENST00000610240 980 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 AC084121.4-201ENST00000641598 221 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 AF228730.8-201ENST00000642140 221 ntBASIC16.65■□□□□ 0.26
AP1S1P61966 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
AP1S1P61966 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.65■□□□□ 0.26
AP1S1P61966 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.65■□□□□ 0.26
AP1S1P61966 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.65■□□□□ 0.26
AP1S1P61966 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.65■□□□□ 0.26
AP1S1P61966 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.65■□□□□ 0.26
AP1S1P61966 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms