Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.93□□□□□ -0.02
VBP1P61758 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.93□□□□□ -0.02
VBP1P61758 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.93□□□□□ -0.02
VBP1P61758 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 AC104771.1-201ENST00000603335 964 ntBASIC14.93□□□□□ -0.02
VBP1P61758 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.93□□□□□ -0.02
VBP1P61758 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.93□□□□□ -0.02
VBP1P61758 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 AL161772.1-201ENST00000610494 4412 ntBASIC14.93□□□□□ -0.02
VBP1P61758 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.93□□□□□ -0.02
VBP1P61758 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.93□□□□□ -0.02
VBP1P61758 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VBP1P61758 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
VBP1P61758 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.92□□□□□ -0.02
VBP1P61758 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.92□□□□□ -0.02
VBP1P61758 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.92□□□□□ -0.02
VBP1P61758 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 RPPH1-201ENST00000516869 333 ntBASIC14.92□□□□□ -0.02
VBP1P61758 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VBP1P61758 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 AC111152.3-201ENST00000569699 673 ntBASIC14.92□□□□□ -0.02
VBP1P61758 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.92□□□□□ -0.02
VBP1P61758 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 AL049757.1-201ENST00000616842 1596 ntBASIC14.92□□□□□ -0.02
VBP1P61758 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VBP1P61758 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
VBP1P61758 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.92□□□□□ -0.02
VBP1P61758 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VBP1P61758 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VBP1P61758 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 AL671710.1-201ENST00000610245 2349 ntBASIC14.91□□□□□ -0.02
VBP1P61758 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VBP1P61758 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.91□□□□□ -0.02
VBP1P61758 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 STK25P1-201ENST00000585406 838 ntBASIC14.91□□□□□ -0.02
VBP1P61758 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 AC006058.3-201ENST00000606217 1069 ntBASIC14.91□□□□□ -0.02
VBP1P61758 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VBP1P61758 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
VBP1P61758 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VBP1P61758 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VBP1P61758 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.91□□□□□ -0.02
VBP1P61758 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms