Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP3S2P59780 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.31□□□□□ -0.12
AP3S2P59780 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AP3S2P59780 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
AP3S2P59780 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.3□□□□□ -0.12
AP3S2P59780 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AP3S2P59780 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.3□□□□□ -0.12
AP3S2P59780 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.3□□□□□ -0.12
AP3S2P59780 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 AC112504.1-201ENST00000623415 1841 ntBASIC14.3□□□□□ -0.12
AP3S2P59780 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AP3S2P59780 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.3□□□□□ -0.12
AP3S2P59780 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.3□□□□□ -0.12
AP3S2P59780 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.3□□□□□ -0.12
AP3S2P59780 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.3□□□□□ -0.12
AP3S2P59780 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 AC073912.3-201ENST00000624414 853 ntBASIC14.3□□□□□ -0.12
AP3S2P59780 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.3□□□□□ -0.12
AP3S2P59780 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.3□□□□□ -0.12
AP3S2P59780 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP3S2P59780 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 KRT8P10-201ENST00000450021 1447 ntBASIC14.3□□□□□ -0.12
AP3S2P59780 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 AC006277.1-201ENST00000624348 1610 ntBASIC14.3□□□□□ -0.12
AP3S2P59780 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
AP3S2P59780 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP3S2P59780 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
AP3S2P59780 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 PRAL-201ENST00000624952 3286 ntBASIC14.29□□□□□ -0.12
AP3S2P59780 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 AC012618.2-201ENST00000428058 849 ntBASIC14.29□□□□□ -0.12
AP3S2P59780 RBM17P1-201ENST00000453646 1190 ntBASIC14.29□□□□□ -0.12
AP3S2P59780 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 AP003071.4-201ENST00000562276 1284 ntBASIC14.29□□□□□ -0.12
AP3S2P59780 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.29□□□□□ -0.12
AP3S2P59780 AL359736.2-201ENST00000621992 437 ntBASIC14.29□□□□□ -0.12
AP3S2P59780 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AP3S2P59780 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms