Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK4P57078 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK4P57078 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.66■■□□□ 1.06
RIPK4P57078 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.65■■□□□ 1.06
RIPK4P57078 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.65■■□□□ 1.06
RIPK4P57078 AC005052.1-201ENST00000625181 2492 ntBASIC21.65■■□□□ 1.06
RIPK4P57078 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.65■■□□□ 1.06
RIPK4P57078 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RIPK4P57078 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RIPK4P57078 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.65■■□□□ 1.06
RIPK4P57078 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.65■■□□□ 1.06
RIPK4P57078 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.65■■□□□ 1.06
RIPK4P57078 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 LINC00628-201ENST00000628516 1289 ntBASIC21.65■■□□□ 1.06
RIPK4P57078 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RIPK4P57078 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RIPK4P57078 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK4P57078 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.65■■□□□ 1.06
RIPK4P57078 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RIPK4P57078 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RIPK4P57078 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RIPK4P57078 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.64■■□□□ 1.06
RIPK4P57078 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RIPK4P57078 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RIPK4P57078 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.64■■□□□ 1.05
RIPK4P57078 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RIPK4P57078 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.64■■□□□ 1.05
RIPK4P57078 PMS2P2-201ENST00000425039 1128 ntBASIC21.64■■□□□ 1.05
RIPK4P57078 RBPMS2P1-201ENST00000437762 623 ntBASIC21.64■■□□□ 1.05
RIPK4P57078 AC093724.1-201ENST00000448659 1027 ntBASIC21.64■■□□□ 1.05
RIPK4P57078 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.64■■□□□ 1.05
RIPK4P57078 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.64■■□□□ 1.05
RIPK4P57078 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.64■■□□□ 1.05
RIPK4P57078 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.64■■□□□ 1.05
RIPK4P57078 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK4P57078 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
RIPK4P57078 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.64■■□□□ 1.05
RIPK4P57078 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.63■■□□□ 1.05
RIPK4P57078 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.63■■□□□ 1.05
RIPK4P57078 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.63■■□□□ 1.05
RIPK4P57078 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.63■■□□□ 1.05
RIPK4P57078 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.63■■□□□ 1.05
RIPK4P57078 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.63■■□□□ 1.05
RIPK4P57078 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.63■■□□□ 1.05
RIPK4P57078 AC093028.1-201ENST00000622998 982 ntBASIC21.63■■□□□ 1.05
RIPK4P57078 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.63■■□□□ 1.05
RIPK4P57078 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.63■■□□□ 1.05
RIPK4P57078 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RIPK4P57078 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK4P57078 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.63■■□□□ 1.05
RIPK4P57078 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
RIPK4P57078 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.62■■□□□ 1.05
RIPK4P57078 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RIPK4P57078 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.62■■□□□ 1.05
RIPK4P57078 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.62■■□□□ 1.05
RIPK4P57078 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK4P57078 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.62■■□□□ 1.05
RIPK4P57078 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.62■■□□□ 1.05
RIPK4P57078 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.62■■□□□ 1.05
RIPK4P57078 LINC01144-201ENST00000626198 1710 ntBASIC21.62■■□□□ 1.05
RIPK4P57078 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms