Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH11P55287 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDH11P55287 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH11P55287 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH11P55287 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH11P55287 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH11P55287 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH11P55287 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH11P55287 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH11P55287 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH11P55287 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH11P55287 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.27■□□□□ 0.04
CDH11P55287 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH11P55287 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH11P55287 FAM215A-202ENST00000632077 792 ntBASIC15.27■□□□□ 0.04
CDH11P55287 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDH11P55287 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDH11P55287 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CDH11P55287 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH11P55287 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH11P55287 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 AL365203.3-201ENST00000609742 2057 ntBASIC15.26■□□□□ 0.03
CDH11P55287 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 AC243591.1-201ENST00000452967 1364 ntBASIC15.26■□□□□ 0.03
CDH11P55287 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDH11P55287 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH11P55287 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH11P55287 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH11P55287 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH11P55287 AC021087.4-201ENST00000563761 564 ntBASIC15.26■□□□□ 0.03
CDH11P55287 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH11P55287 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 AC139887.3-201ENST00000568585 713 ntBASIC15.26■□□□□ 0.03
CDH11P55287 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH11P55287 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDH11P55287 AL049840.3-201ENST00000602669 611 ntBASIC15.26■□□□□ 0.03
CDH11P55287 AD001527.2-201ENST00000622994 785 ntBASIC15.26■□□□□ 0.03
CDH11P55287 AC073592.5-201ENST00000624854 528 ntBASIC15.26■□□□□ 0.03
CDH11P55287 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 AC006538.1-201ENST00000567905 1585 ntBASIC15.26■□□□□ 0.03
CDH11P55287 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 AL596257.1-201ENST00000641463 2694 ntBASIC15.26■□□□□ 0.03
CDH11P55287 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH11P55287 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDH11P55287 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH11P55287 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH11P55287 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH11P55287 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CDH11P55287 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms