Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTPN5P54829 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN5P54829 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN5P54829 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN5P54829 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN5P54829 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PTPN5P54829 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN5P54829 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 AC234783.1-201ENST00000441761 496 ntBASIC17.1■□□□□ 0.33
PTPN5P54829 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN5P54829 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 KRT223P-202ENST00000449164 1292 ntBASIC17.1■□□□□ 0.33
PTPN5P54829 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN5P54829 AC090142.2-201ENST00000483263 416 ntBASIC17.1■□□□□ 0.33
PTPN5P54829 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN5P54829 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN5P54829 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 AL391825.1-201ENST00000457671 1364 ntBASIC17.1■□□□□ 0.33
PTPN5P54829 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN5P54829 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN5P54829 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN5P54829 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN5P54829 DFFBP1-201ENST00000433250 979 ntBASIC17.09■□□□□ 0.33
PTPN5P54829 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN5P54829 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 AL512343.1-201ENST00000605837 169 ntBASIC17.09■□□□□ 0.33
PTPN5P54829 GPR182-203ENST00000622922 591 ntBASIC17.09■□□□□ 0.33
PTPN5P54829 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PTPN5P54829 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 AP001094.4-201ENST00000579008 2176 ntBASIC17.09■□□□□ 0.33
PTPN5P54829 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN5P54829 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PTPN5P54829 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN5P54829 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PTPN5P54829 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN5P54829 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN5P54829 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN5P54829 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN5P54829 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.08■□□□□ 0.33
PTPN5P54829 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms