Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC25A1P53007 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC25A1P53007 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC25A1P53007 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC25A1P53007 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC25A1P53007 AC073648.2-201ENST00000510116 352 ntBASIC14.75□□□□□ -0.05
SLC25A1P53007 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC25A1P53007 MIR1199-201ENST00000621445 119 ntBASIC14.75□□□□□ -0.05
SLC25A1P53007 PGM5P2-202ENST00000637225 1043 ntBASIC14.75□□□□□ -0.05
SLC25A1P53007 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC25A1P53007 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC25A1P53007 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC25A1P53007 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC25A1P53007 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC25A1P53007 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC25A1P53007 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SLC25A1P53007 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC25A1P53007 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 MIR648-201ENST00000385046 94 ntBASIC14.74□□□□□ -0.05
SLC25A1P53007 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC25A1P53007 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 AC008735.5-201ENST00000623544 497 ntBASIC14.74□□□□□ -0.05
SLC25A1P53007 AC012569.1-201ENST00000591191 1524 ntBASIC14.74□□□□□ -0.05
SLC25A1P53007 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC25A1P53007 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC25A1P53007 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC25A1P53007 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC25A1P53007 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SLC25A1P53007 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC25A1P53007 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SLC25A1P53007 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC25A1P53007 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC25A1P53007 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SLC25A1P53007 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC25A1P53007 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC25A1P53007 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC25A1P53007 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC25A1P53007 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC25A1P53007 MRPL20P1-201ENST00000400819 433 ntBASIC14.73□□□□□ -0.05
SLC25A1P53007 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SLC25A1P53007 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC25A1P53007 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SLC25A1P53007 RNPS1P1-201ENST00000507437 918 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms