Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGA2P52926 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGA2P52926 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGA2P52926 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGA2P52926 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMGA2P52926 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGA2P52926 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGA2P52926 AC073347.1-201ENST00000421633 2643 ntBASIC15.14■□□□□ 0.01
HMGA2P52926 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.14■□□□□ 0.01
HMGA2P52926 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGA2P52926 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGA2P52926 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGA2P52926 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGA2P52926 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGA2P52926 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGA2P52926 MTDHP3-201ENST00000594186 672 ntBASIC15.14■□□□□ 0.01
HMGA2P52926 AL355877.3-201ENST00000622820 899 ntBASIC15.14■□□□□ 0.01
HMGA2P52926 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGA2P52926 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
HMGA2P52926 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 AC005622.1-201ENST00000636801 1703 ntBASIC15.14■□□□□ 0.01
HMGA2P52926 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGA2P52926 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMGA2P52926 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGA2P52926 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGA2P52926 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGA2P52926 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.13■□□□□ 0.01
HMGA2P52926 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGA2P52926 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGA2P52926 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HMGA2P52926 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGA2P52926 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HMGA2P52926 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 MTDHP4-201ENST00000600287 670 ntBASIC15.13■□□□□ 0.01
HMGA2P52926 AC069148.1-201ENST00000608741 768 ntBASIC15.13■□□□□ 0.01
HMGA2P52926 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HMGA2P52926 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGA2P52926 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGA2P52926 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 AC144831.1-201ENST00000573312 2656 ntBASIC15.12■□□□□ 0.01
HMGA2P52926 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HMGA2P52926 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMGA2P52926 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms