Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDC34P49427 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC34P49427 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDC34P49427 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.17□□□□□ -0.3
CDC34P49427 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.17□□□□□ -0.3
CDC34P49427 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 DUX4L17-201ENST00000557360 1267 ntBASIC13.17□□□□□ -0.3
CDC34P49427 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CDC34P49427 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.17□□□□□ -0.3
CDC34P49427 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 LINC02228-204ENST00000642115 2962 ntBASIC13.17□□□□□ -0.3
CDC34P49427 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC34P49427 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC34P49427 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC34P49427 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 PRORSD1P-201ENST00000295112 541 ntBASIC13.16□□□□□ -0.3
CDC34P49427 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.16□□□□□ -0.3
CDC34P49427 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 AC140113.3-201ENST00000605663 199 ntBASIC13.16□□□□□ -0.3
CDC34P49427 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC34P49427 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC34P49427 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms