Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TNNI2P48788 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 KRT8P39-201ENST00000396270 1433 ntBASIC19.61■□□□□ 0.73
TNNI2P48788 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.61■□□□□ 0.73
TNNI2P48788 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNNI2P48788 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TNNI2P48788 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.61■□□□□ 0.73
TNNI2P48788 HLA-J-202ENST00000469281 1241 ntBASIC19.61■□□□□ 0.73
TNNI2P48788 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.61■□□□□ 0.73
TNNI2P48788 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TNNI2P48788 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.61■□□□□ 0.73
TNNI2P48788 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.61■□□□□ 0.73
TNNI2P48788 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNNI2P48788 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNNI2P48788 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNNI2P48788 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.61■□□□□ 0.73
TNNI2P48788 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
TNNI2P48788 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNNI2P48788 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.6■□□□□ 0.73
TNNI2P48788 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TNNI2P48788 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.6■□□□□ 0.73
TNNI2P48788 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.6■□□□□ 0.73
TNNI2P48788 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 BANF1P1-201ENST00000553684 263 ntBASIC19.6■□□□□ 0.73
TNNI2P48788 AL079307.3-201ENST00000556114 283 ntBASIC19.6■□□□□ 0.73
TNNI2P48788 AC140912.1-201ENST00000577171 1054 ntBASIC19.6■□□□□ 0.73
TNNI2P48788 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNNI2P48788 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNNI2P48788 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.6■□□□□ 0.73
TNNI2P48788 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.6■□□□□ 0.73
TNNI2P48788 BTBD7P1-201ENST00000447253 1453 ntBASIC19.6■□□□□ 0.73
TNNI2P48788 AL645608.8-201ENST00000606034 2086 ntBASIC19.6■□□□□ 0.73
TNNI2P48788 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.59■□□□□ 0.73
TNNI2P48788 AL671710.1-201ENST00000610245 2349 ntBASIC19.59■□□□□ 0.73
TNNI2P48788 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
TNNI2P48788 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TNNI2P48788 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNNI2P48788 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.59■□□□□ 0.73
TNNI2P48788 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNNI2P48788 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNNI2P48788 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNNI2P48788 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.59■□□□□ 0.73
TNNI2P48788 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 MEIS3P1-201ENST00000495167 958 ntBASIC19.59■□□□□ 0.73
TNNI2P48788 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.59■□□□□ 0.73
TNNI2P48788 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.59■□□□□ 0.73
TNNI2P48788 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 AL133215.2-201ENST00000609242 977 ntBASIC19.59■□□□□ 0.73
TNNI2P48788 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.59■□□□□ 0.73
TNNI2P48788 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TNNI2P48788 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TNNI2P48788 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNNI2P48788 AC026471.1-201ENST00000564629 3026 ntBASIC19.59■□□□□ 0.73
TNNI2P48788 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNNI2P48788 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TNNI2P48788 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms