Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.21□□□□□ -0.62
PCP4P48539 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
PCP4P48539 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.21□□□□□ -0.62
PCP4P48539 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
PCP4P48539 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC11.21□□□□□ -0.62
PCP4P48539 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.21□□□□□ -0.62
PCP4P48539 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.21□□□□□ -0.62
PCP4P48539 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
PCP4P48539 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC11.21□□□□□ -0.62
PCP4P48539 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC11.21□□□□□ -0.62
PCP4P48539 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
PCP4P48539 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PCP4P48539 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 MTHFR-210ENST00000641407 2387 ntBASIC11.2□□□□□ -0.62
PCP4P48539 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 AC099343.3-201ENST00000605834 2503 ntBASIC11.2□□□□□ -0.62
PCP4P48539 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 CICP1-201ENST00000416803 2410 ntBASIC11.2□□□□□ -0.62
PCP4P48539 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 AC009078.3-201ENST00000624205 4084 ntBASIC11.2□□□□□ -0.62
PCP4P48539 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
PCP4P48539 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PCP4P48539 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
PCP4P48539 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PCP4P48539 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
PCP4P48539 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.19□□□□□ -0.62
PCP4P48539 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
PCP4P48539 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.19□□□□□ -0.62
PCP4P48539 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
PCP4P48539 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PCP4P48539 AC133963.1-201ENST00000504166 1679 ntBASIC11.19□□□□□ -0.62
PCP4P48539 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms