Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
BRCC3P46736 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCC3P46736 UBALD1-205ENST00000590891 2641 ntBASIC17.57■□□□□ 0.4
BRCC3P46736 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BRCC3P46736 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.57■□□□□ 0.4
BRCC3P46736 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCC3P46736 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BRCC3P46736 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 AL035633.1-201ENST00000406139 838 ntBASIC17.57■□□□□ 0.4
BRCC3P46736 AC093724.1-201ENST00000448659 1027 ntBASIC17.57■□□□□ 0.4
BRCC3P46736 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.57■□□□□ 0.4
BRCC3P46736 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCC3P46736 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.57■□□□□ 0.4
BRCC3P46736 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
BRCC3P46736 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.57■□□□□ 0.4
BRCC3P46736 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.57■□□□□ 0.4
BRCC3P46736 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.57■□□□□ 0.4
BRCC3P46736 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 AC073592.8-201ENST00000624126 511 ntBASIC17.57■□□□□ 0.4
BRCC3P46736 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCC3P46736 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
BRCC3P46736 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRCC3P46736 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 AC080080.1-201ENST00000625121 2420 ntBASIC17.57■□□□□ 0.4
BRCC3P46736 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BRCC3P46736 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRCC3P46736 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCC3P46736 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BRCC3P46736 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCC3P46736 AC236430.1-201ENST00000402231 743 ntBASIC17.56■□□□□ 0.4
BRCC3P46736 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.56■□□□□ 0.4
BRCC3P46736 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.56■□□□□ 0.4
BRCC3P46736 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCC3P46736 TSPY16P-201ENST00000449843 468 ntBASIC17.56■□□□□ 0.4
BRCC3P46736 AL512638.1-201ENST00000457493 794 ntBASIC17.56■□□□□ 0.4
BRCC3P46736 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.56■□□□□ 0.4
BRCC3P46736 AC138761.1-201ENST00000584393 385 ntBASIC17.56■□□□□ 0.4
BRCC3P46736 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.56■□□□□ 0.4
BRCC3P46736 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.56■□□□□ 0.4
BRCC3P46736 AC020765.3-201ENST00000613051 740 ntBASIC17.56■□□□□ 0.4
BRCC3P46736 AL138828.2-201ENST00000615812 383 ntBASIC17.56■□□□□ 0.4
BRCC3P46736 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BRCC3P46736 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRCC3P46736 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BRCC3P46736 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.55■□□□□ 0.4
BRCC3P46736 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 LTB4R2-202ENST00000528054 3092 ntBASIC17.55■□□□□ 0.4
BRCC3P46736 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.55■□□□□ 0.4
BRCC3P46736 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCC3P46736 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
BRCC3P46736 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCC3P46736 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 BANF1P1-201ENST00000553684 263 ntBASIC17.55■□□□□ 0.4
BRCC3P46736 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.55■□□□□ 0.4
BRCC3P46736 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.55■□□□□ 0.4
BRCC3P46736 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BRCC3P46736 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BRCC3P46736 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCC3P46736 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCC3P46736 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms