Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP13P45452 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP13P45452 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MMP13P45452 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MMP13P45452 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MMP13P45452 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP13P45452 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP13P45452 AC126177.1-201ENST00000547829 2218 ntBASIC17.28■□□□□ 0.36
MMP13P45452 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP13P45452 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MMP13P45452 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MMP13P45452 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MMP13P45452 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP13P45452 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MMP13P45452 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MMP13P45452 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.28■□□□□ 0.36
MMP13P45452 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP13P45452 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MMP13P45452 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 KRT8P49-201ENST00000604166 1432 ntBASIC17.28■□□□□ 0.36
MMP13P45452 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP13P45452 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 ME2P1-201ENST00000426028 1970 ntBASIC17.28■□□□□ 0.36
MMP13P45452 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
MMP13P45452 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP13P45452 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP13P45452 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 IL9RP2-201ENST00000423948 1312 ntBASIC17.27■□□□□ 0.36
MMP13P45452 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MMP13P45452 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MMP13P45452 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP13P45452 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MMP13P45452 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP13P45452 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.27■□□□□ 0.36
MMP13P45452 AL590627.1-203ENST00000421194 1026 ntBASIC17.27■□□□□ 0.36
MMP13P45452 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.27■□□□□ 0.36
MMP13P45452 AC009947.1-201ENST00000444350 727 ntBASIC17.27■□□□□ 0.36
MMP13P45452 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.27■□□□□ 0.36
MMP13P45452 MIR4751-201ENST00000578027 74 ntBASIC17.27■□□□□ 0.36
MMP13P45452 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.27■□□□□ 0.36
MMP13P45452 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP13P45452 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP13P45452 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.27■□□□□ 0.35
MMP13P45452 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.27■□□□□ 0.35
MMP13P45452 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP13P45452 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP13P45452 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
MMP13P45452 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MMP13P45452 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP13P45452 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP13P45452 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP13P45452 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MMP13P45452 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP13P45452 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP13P45452 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP13P45452 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP13P45452 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
MMP13P45452 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 Z83851.2-201ENST00000609564 659 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms