Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.23■□□□□ 0.83
PDE6BP35913 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PDE6BP35913 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDE6BP35913 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PDE6BP35913 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.23■□□□□ 0.83
PDE6BP35913 CROCCP4-201ENST00000457096 498 ntBASIC20.23■□□□□ 0.83
PDE6BP35913 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.23■□□□□ 0.83
PDE6BP35913 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 AC104596.2-201ENST00000512793 793 ntBASIC20.23■□□□□ 0.83
PDE6BP35913 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.23■□□□□ 0.83
PDE6BP35913 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.23■□□□□ 0.83
PDE6BP35913 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.23■□□□□ 0.83
PDE6BP35913 AC008764.6-201ENST00000595909 2069 ntBASIC20.23■□□□□ 0.83
PDE6BP35913 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6BP35913 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDE6BP35913 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.22■□□□□ 0.83
PDE6BP35913 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PDE6BP35913 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PDE6BP35913 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDE6BP35913 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 AC092053.1-201ENST00000605787 1936 ntBASIC20.22■□□□□ 0.83
PDE6BP35913 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.22■□□□□ 0.83
PDE6BP35913 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
PDE6BP35913 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 KRT43P-201ENST00000434019 910 ntBASIC20.22■□□□□ 0.83
PDE6BP35913 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.22■□□□□ 0.83
PDE6BP35913 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.22■□□□□ 0.83
PDE6BP35913 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PDE6BP35913 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.22■□□□□ 0.83
PDE6BP35913 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.22■□□□□ 0.83
PDE6BP35913 RARRES2P5-201ENST00000564013 466 ntBASIC20.22■□□□□ 0.83
PDE6BP35913 BTNL10-201ENST00000595971 695 ntBASIC20.22■□□□□ 0.83
PDE6BP35913 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.22■□□□□ 0.83
PDE6BP35913 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 CLK3P2-201ENST00000427566 1453 ntBASIC20.22■□□□□ 0.83
PDE6BP35913 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PDE6BP35913 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDE6BP35913 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDE6BP35913 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6BP35913 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE6BP35913 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE6BP35913 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE6BP35913 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE6BP35913 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.21■□□□□ 0.83
PDE6BP35913 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE6BP35913 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDE6BP35913 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE6BP35913 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.21■□□□□ 0.83
PDE6BP35913 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.21■□□□□ 0.83
PDE6BP35913 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.21■□□□□ 0.83
PDE6BP35913 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE6BP35913 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE6BP35913 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 CDC14C-201ENST00000428251 1719 ntBASIC20.21■□□□□ 0.83
PDE6BP35913 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6BP35913 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms