Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
KRT20P35900 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT20P35900 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
KRT20P35900 AC105339.3-201ENST00000560043 636 ntBASIC15.86■□□□□ 0.13
KRT20P35900 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT20P35900 AC008735.5-201ENST00000623544 497 ntBASIC15.86■□□□□ 0.13
KRT20P35900 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
KRT20P35900 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
KRT20P35900 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
KRT20P35900 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
KRT20P35900 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.85■□□□□ 0.13
KRT20P35900 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
KRT20P35900 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 AP001005.1-201ENST00000571755 1248 ntBASIC15.85■□□□□ 0.13
KRT20P35900 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 AC104692.2-201ENST00000603054 253 ntBASIC15.85■□□□□ 0.13
KRT20P35900 AC005593.1-201ENST00000624894 515 ntBASIC15.85■□□□□ 0.13
KRT20P35900 PGM5P2-202ENST00000637225 1043 ntBASIC15.85■□□□□ 0.13
KRT20P35900 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT20P35900 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.85■□□□□ 0.13
KRT20P35900 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT20P35900 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT20P35900 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT20P35900 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 AL031284.1-201ENST00000419297 478 ntBASIC15.84■□□□□ 0.13
KRT20P35900 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 AC136632.2-201ENST00000512891 861 ntBASIC15.84■□□□□ 0.13
KRT20P35900 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
KRT20P35900 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 AL121894.2-201ENST00000602977 491 ntBASIC15.84■□□□□ 0.13
KRT20P35900 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT20P35900 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
KRT20P35900 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT20P35900 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms