Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.82■□□□□ 0.6
CNGA1P29973 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CNGA1P29973 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.82■□□□□ 0.6
CNGA1P29973 MTND6P24-201ENST00000440466 518 ntBASIC18.82■□□□□ 0.6
CNGA1P29973 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.82■□□□□ 0.6
CNGA1P29973 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.82■□□□□ 0.6
CNGA1P29973 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.82■□□□□ 0.6
CNGA1P29973 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CNGA1P29973 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.82■□□□□ 0.6
CNGA1P29973 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.82■□□□□ 0.6
CNGA1P29973 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNGA1P29973 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.81■□□□□ 0.6
CNGA1P29973 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CNGA1P29973 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 HLA-V-204ENST00000476601 1289 ntBASIC18.81■□□□□ 0.6
CNGA1P29973 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 AC021097.1-201ENST00000607902 574 ntBASIC18.81■□□□□ 0.6
CNGA1P29973 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.81■□□□□ 0.6
CNGA1P29973 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.81■□□□□ 0.6
CNGA1P29973 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.81■□□□□ 0.6
CNGA1P29973 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 AP001094.4-201ENST00000579008 2176 ntBASIC18.81■□□□□ 0.6
CNGA1P29973 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNGA1P29973 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CNGA1P29973 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNGA1P29973 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNGA1P29973 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CNGA1P29973 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.8■□□□□ 0.6
CNGA1P29973 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 CYP2A7P1-201ENST00000595391 815 ntBASIC18.8■□□□□ 0.6
CNGA1P29973 AL132655.2-201ENST00000596276 594 ntBASIC18.8■□□□□ 0.6
CNGA1P29973 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNGA1P29973 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
CNGA1P29973 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms