Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.32■■□□□ 1
RXRBP28702 AC016700.1-201ENST00000429424 312 ntBASIC21.32■■□□□ 1
RXRBP28702 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.32■■□□□ 1
RXRBP28702 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.32■■□□□ 1
RXRBP28702 SPTLC1P5-201ENST00000450718 252 ntBASIC21.32■■□□□ 1
RXRBP28702 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.32■■□□□ 1
RXRBP28702 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC21.32■■□□□ 1
RXRBP28702 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.32■■□□□ 1
RXRBP28702 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.32■■□□□ 1
RXRBP28702 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.32■■□□□ 1
RXRBP28702 AC025279.2-201ENST00000569730 653 ntBASIC21.32■■□□□ 1
RXRBP28702 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.32■■□□□ 1
RXRBP28702 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RXRBP28702 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
RXRBP28702 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RXRBP28702 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RXRBP28702 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.31■■□□□ 1
RXRBP28702 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.31■■□□□ 1
RXRBP28702 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.31■■□□□ 1
RXRBP28702 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.31■■□□□ 1
RXRBP28702 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RXRBP28702 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RXRBP28702 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.31■■□□□ 1
RXRBP28702 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.31■■□□□ 1
RXRBP28702 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.31■■□□□ 1
RXRBP28702 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.31■■□□□ 1
RXRBP28702 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RXRBP28702 PTK2-225ENST00000520892 571 ntTSL 4 BASIC21.31■■□□□ 1
RXRBP28702 AC078819.1-201ENST00000547454 765 ntBASIC21.31■■□□□ 1
RXRBP28702 AC012085.1-201ENST00000548270 765 ntBASIC21.31■■□□□ 1
RXRBP28702 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC21.31■■□□□ 1
RXRBP28702 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.31■■□□□ 1
RXRBP28702 AL133499.1-201ENST00000596207 608 ntBASIC21.31■■□□□ 1
RXRBP28702 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RXRBP28702 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RXRBP28702 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.3■■□□□ 1
RXRBP28702 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.3■■□□□ 1
RXRBP28702 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.3■■□□□ 1
RXRBP28702 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RXRBP28702 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.3■■□□□ 1
RXRBP28702 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.3■■□□□ 1
RXRBP28702 FAM197Y7-201ENST00000432892 766 ntBASIC21.3■■□□□ 1
RXRBP28702 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 POM121L10P-201ENST00000436994 1285 ntBASIC21.3■■□□□ 1
RXRBP28702 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.3■■□□□ 1
RXRBP28702 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.3■■□□□ 1
RXRBP28702 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC21.3■■□□□ 1
RXRBP28702 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
RXRBP28702 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.3■■□□□ 1
RXRBP28702 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC21.3■■□□□ 1
RXRBP28702 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.3■■□□□ 1
RXRBP28702 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RXRBP28702 MIR6756-201ENST00000616240 63 ntBASIC21.3■■□□□ 1
RXRBP28702 AC138951.2-201ENST00000623455 1161 ntBASIC21.3■■□□□ 1
RXRBP28702 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.3■■□□□ 1
RXRBP28702 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
RXRBP28702 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.3■■□□□ 1
RXRBP28702 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.3■■□□□ 1
RXRBP28702 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RXRBP28702 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.29■■□□□ 1
RXRBP28702 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RXRBP28702 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.29■■□□□ 1
RXRBP28702 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.29■■□□□ 1
RXRBP28702 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.29■■□□□ 1
RXRBP28702 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RXRBP28702 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms