Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.04■□□□□ 0.8
KCNA3P22001 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNA3P22001 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.04■□□□□ 0.8
KCNA3P22001 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KCNA3P22001 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 LINC01115-203ENST00000606068 577 ntBASIC20.04■□□□□ 0.8
KCNA3P22001 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.04■□□□□ 0.8
KCNA3P22001 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KCNA3P22001 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNA3P22001 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA3P22001 TUBB8P12-201ENST00000308911 1335 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 TUBB7P-202ENST00000428444 1305 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 TUBB8P7-204ENST00000567960 1332 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KCNA3P22001 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KCNA3P22001 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KCNA3P22001 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNA3P22001 Z97205.2-201ENST00000564697 1639 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNA3P22001 RPL13AP20-201ENST00000459725 609 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.03■□□□□ 0.8
KCNA3P22001 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNA3P22001 AL359711.2-201ENST00000563105 872 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 RN7SL190P-201ENST00000582519 257 ntBASIC20.03■□□□□ 0.8
KCNA3P22001 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNA3P22001 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNA3P22001 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA3P22001 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.02■□□□□ 0.8
KCNA3P22001 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNA3P22001 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNA3P22001 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNA3P22001 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KCNA3P22001 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.02■□□□□ 0.8
KCNA3P22001 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.02■□□□□ 0.8
KCNA3P22001 AL158212.4-201ENST00000624062 1286 ntBASIC20.02■□□□□ 0.8
KCNA3P22001 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNA3P22001 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA3P22001 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNA3P22001 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KCNA3P22001 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KCNA3P22001 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.02■□□□□ 0.79
KCNA3P22001 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNA3P22001 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNA3P22001 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KCNA3P22001 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNA3P22001 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNA3P22001 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNA3P22001 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNA3P22001 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNA3P22001 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
KCNA3P22001 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNA3P22001 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNA3P22001 KRT8P13-201ENST00000463294 1010 ntBASIC20.01■□□□□ 0.79
KCNA3P22001 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.01■□□□□ 0.79
KCNA3P22001 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNA3P22001 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNA3P22001 AC124947.2-201ENST00000547118 1133 ntBASIC20.01■□□□□ 0.79
KCNA3P22001 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNA3P22001 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNA3P22001 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNA3P22001 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms