Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 MYCLP1-201ENST00000372451 1075 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 SPDYE21P-201ENST00000413323 827 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA1P21709 KRT18P27-201ENST00000427733 1299 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA1P21709 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA1P21709 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.31□□□□□ -0.12
EPHA1P21709 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA1P21709 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA1P21709 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.31□□□□□ -0.12
EPHA1P21709 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA1P21709 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA1P21709 MTDHP5-201ENST00000598980 586 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA1P21709 AC073592.5-201ENST00000624854 528 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 AC134684.3-201ENST00000641758 218 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 SIGLEC16-201ENST00000599858 1437 ntBASIC14.31□□□□□ -0.12
EPHA1P21709 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
EPHA1P21709 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA1P21709 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA1P21709 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA1P21709 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EPHA1P21709 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 AC004817.3-201ENST00000602957 2129 ntBASIC14.3□□□□□ -0.12
EPHA1P21709 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
EPHA1P21709 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.3□□□□□ -0.12
EPHA1P21709 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.3□□□□□ -0.12
EPHA1P21709 PRYP5-201ENST00000451909 266 ntBASIC14.3□□□□□ -0.12
EPHA1P21709 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.3□□□□□ -0.12
EPHA1P21709 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.3□□□□□ -0.12
EPHA1P21709 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.3□□□□□ -0.12
EPHA1P21709 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 AD001527.2-201ENST00000622994 785 ntBASIC14.3□□□□□ -0.12
EPHA1P21709 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.3□□□□□ -0.12
EPHA1P21709 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
EPHA1P21709 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA1P21709 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EPHA1P21709 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA1P21709 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms