Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB4AP20338 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 CICP24-201ENST00000605464 2705 ntBASIC12.79□□□□□ -0.36
RAB4AP20338 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 LINC02012-201ENST00000608206 1725 ntBASIC12.79□□□□□ -0.36
RAB4AP20338 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.79□□□□□ -0.36
RAB4AP20338 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB4AP20338 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
RAB4AP20338 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
RAB4AP20338 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RAB4AP20338 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB4AP20338 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB4AP20338 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.78□□□□□ -0.36
RAB4AP20338 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 LINC01311-201ENST00000565162 1445 ntBASIC12.78□□□□□ -0.36
RAB4AP20338 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 RNF216P1-203ENST00000404404 2427 ntBASIC12.78□□□□□ -0.36
RAB4AP20338 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB4AP20338 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB4AP20338 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
RAB4AP20338 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms