Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.71■□□□□ 0.26
KRT4P19013 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.71■□□□□ 0.26
KRT4P19013 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT4P19013 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT4P19013 PRAL-201ENST00000624952 3286 ntBASIC16.71■□□□□ 0.26
KRT4P19013 KRT18P1-202ENST00000452408 1331 ntBASIC16.7■□□□□ 0.26
KRT4P19013 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
KRT4P19013 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
KRT4P19013 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 KRT17P6-201ENST00000453795 1220 ntBASIC16.7■□□□□ 0.26
KRT4P19013 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT4P19013 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
KRT4P19013 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 AC073347.1-201ENST00000421633 2643 ntBASIC16.7■□□□□ 0.26
KRT4P19013 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 KRT8P39-201ENST00000396270 1433 ntBASIC16.7■□□□□ 0.26
KRT4P19013 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT4P19013 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT4P19013 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT4P19013 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT4P19013 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT4P19013 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT4P19013 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT4P19013 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT4P19013 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KRT4P19013 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT4P19013 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KRT4P19013 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 DUX4L26-201ENST00000489078 1255 ntBASIC16.69■□□□□ 0.26
KRT4P19013 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT4P19013 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT4P19013 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
KRT4P19013 AL353135.1-201ENST00000606729 504 ntBASIC16.69■□□□□ 0.26
KRT4P19013 AC114341.1-201ENST00000618070 349 ntBASIC16.69■□□□□ 0.26
KRT4P19013 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT4P19013 AC079776.2-201ENST00000641154 1609 ntBASIC16.69■□□□□ 0.26
KRT4P19013 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT4P19013 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms