Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.59■□□□□ 0.25
XRCC1P18887 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.59■□□□□ 0.25
XRCC1P18887 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
XRCC1P18887 KRT19P2-202ENST00000557173 1012 ntBASIC16.59■□□□□ 0.25
XRCC1P18887 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.59■□□□□ 0.25
XRCC1P18887 PDPK2P-202ENST00000562415 1191 ntBASIC16.59■□□□□ 0.25
XRCC1P18887 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.59■□□□□ 0.25
XRCC1P18887 BCAR1-209ENST00000546196 1340 ntBASIC16.59■□□□□ 0.25
XRCC1P18887 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XRCC1P18887 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XRCC1P18887 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XRCC1P18887 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.59■□□□□ 0.25
XRCC1P18887 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
XRCC1P18887 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XRCC1P18887 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
XRCC1P18887 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
XRCC1P18887 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XRCC1P18887 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.58■□□□□ 0.25
XRCC1P18887 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.58■□□□□ 0.25
XRCC1P18887 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
XRCC1P18887 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.58■□□□□ 0.24
XRCC1P18887 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.58■□□□□ 0.24
XRCC1P18887 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.58■□□□□ 0.24
XRCC1P18887 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.58■□□□□ 0.24
XRCC1P18887 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.58■□□□□ 0.24
XRCC1P18887 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 ACTL9-202ENST00000612068 1252 ntBASIC16.58■□□□□ 0.24
XRCC1P18887 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.58■□□□□ 0.24
XRCC1P18887 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
XRCC1P18887 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 AC025580.3-201ENST00000617932 1424 ntBASIC16.58■□□□□ 0.24
XRCC1P18887 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.58■□□□□ 0.24
XRCC1P18887 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
XRCC1P18887 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.58■□□□□ 0.24
XRCC1P18887 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.58■□□□□ 0.24
XRCC1P18887 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XRCC1P18887 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
XRCC1P18887 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.57■□□□□ 0.24
XRCC1P18887 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 AL513477.1-201ENST00000602865 2407 ntBASIC16.57■□□□□ 0.24
XRCC1P18887 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.57■□□□□ 0.24
XRCC1P18887 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
XRCC1P18887 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
XRCC1P18887 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.57■□□□□ 0.24
XRCC1P18887 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.57■□□□□ 0.24
XRCC1P18887 AC074386.1-202ENST00000463561 864 ntBASIC16.57■□□□□ 0.24
XRCC1P18887 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.57■□□□□ 0.24
XRCC1P18887 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.57■□□□□ 0.24
XRCC1P18887 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.57■□□□□ 0.24
XRCC1P18887 AC005829.1-201ENST00000570002 483 ntBASIC16.57■□□□□ 0.24
XRCC1P18887 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.57■□□□□ 0.24
XRCC1P18887 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.57■□□□□ 0.24
XRCC1P18887 AC055717.3-201ENST00000622967 595 ntBASIC16.57■□□□□ 0.24
XRCC1P18887 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
XRCC1P18887 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 AC105917.1-201ENST00000506637 2539 ntBASIC16.57■□□□□ 0.24
XRCC1P18887 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.57■□□□□ 0.24
XRCC1P18887 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XRCC1P18887 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC1P18887 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC1P18887 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
XRCC1P18887 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
XRCC1P18887 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC1P18887 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.56■□□□□ 0.24
XRCC1P18887 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC1P18887 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.56■□□□□ 0.24
XRCC1P18887 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.56■□□□□ 0.24
XRCC1P18887 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.56■□□□□ 0.24
XRCC1P18887 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
XRCC1P18887 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC1P18887 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC1P18887 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms