Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.74■□□□□ 0.11
NCK1P16333 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.74■□□□□ 0.11
NCK1P16333 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCK1P16333 NORAD-201ENST00000565493 5339 ntBASIC15.74■□□□□ 0.11
NCK1P16333 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 CHCHD2P8-201ENST00000429873 447 ntBASIC15.73■□□□□ 0.11
NCK1P16333 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.73■□□□□ 0.11
NCK1P16333 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 MINOS1P3-201ENST00000457048 203 ntBASIC15.73■□□□□ 0.11
NCK1P16333 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.73■□□□□ 0.11
NCK1P16333 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.73■□□□□ 0.11
NCK1P16333 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.73■□□□□ 0.11
NCK1P16333 BNIP3P18-201ENST00000593976 575 ntBASIC15.73■□□□□ 0.11
NCK1P16333 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NCK1P16333 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.73■□□□□ 0.11
NCK1P16333 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 AC233702.3-201ENST00000578656 1387 ntBASIC15.73■□□□□ 0.11
NCK1P16333 AC002310.6-201ENST00000624451 1377 ntBASIC15.73■□□□□ 0.11
NCK1P16333 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.73■□□□□ 0.11
NCK1P16333 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCK1P16333 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NCK1P16333 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.72■□□□□ 0.11
NCK1P16333 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 AL590787.1-201ENST00000568856 1315 ntBASIC15.72■□□□□ 0.11
NCK1P16333 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.72■□□□□ 0.11
NCK1P16333 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.72■□□□□ 0.11
NCK1P16333 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.72■□□□□ 0.11
NCK1P16333 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NCK1P16333 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 AL136379.1-201ENST00000623471 2642 ntBASIC15.72■□□□□ 0.11
NCK1P16333 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.72■□□□□ 0.11
NCK1P16333 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCK1P16333 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
NCK1P16333 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms