Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AC013467.2-201ENST00000605472 835 ntBASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 MIR6080-201ENST00000617359 66 ntBASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 AC069120.2-201ENST00000524091 540 ntBASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40ALP0C0E4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AC142381.1-201ENST00000426099 345 ntBASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms