Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT6AP02538 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 AC073621.1-201ENST00000392730 636 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT6AP02538 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
KRT6AP02538 PMS2P1-201ENST00000431037 1228 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 KRT18P56-201ENST00000507275 550 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 RNPS1P1-201ENST00000507437 918 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 AC107918.2-201ENST00000530817 355 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT6AP02538 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT6AP02538 AC008667.4-201ENST00000607370 168 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 PGM5P2-202ENST00000637225 1043 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 AL031731.1-201ENST00000642131 2094 ntBASIC16.13■□□□□ 0.17
KRT6AP02538 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
KRT6AP02538 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
KRT6AP02538 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 SLC22A20-204ENST00000530038 1673 ntBASIC16.12■□□□□ 0.17
KRT6AP02538 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 HCG4-201ENST00000418983 998 ntBASIC16.12■□□□□ 0.17
KRT6AP02538 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.12■□□□□ 0.17
KRT6AP02538 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT6AP02538 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.12■□□□□ 0.17
KRT6AP02538 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 AC008735.5-201ENST00000623544 497 ntBASIC16.12■□□□□ 0.17
KRT6AP02538 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 AC005052.1-201ENST00000625181 2492 ntBASIC16.12■□□□□ 0.17
KRT6AP02538 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
KRT6AP02538 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT6AP02538 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT6AP02538 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.11■□□□□ 0.17
KRT6AP02538 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT6AP02538 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT6AP02538 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms