Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.69■□□□□ 0.42
TIMP1P01033 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 AL512652.2-201ENST00000625156 1716 ntBASIC17.69■□□□□ 0.42
TIMP1P01033 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMP1P01033 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMP1P01033 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TIMP1P01033 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMP1P01033 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.69■□□□□ 0.42
TIMP1P01033 TDH-203ENST00000531764 1110 ntBASIC17.69■□□□□ 0.42
TIMP1P01033 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.69■□□□□ 0.42
TIMP1P01033 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMP1P01033 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TIMP1P01033 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP1P01033 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 AC092053.1-201ENST00000605787 1936 ntBASIC17.68■□□□□ 0.42
TIMP1P01033 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TIMP1P01033 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TIMP1P01033 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 AC108725.1-201ENST00000495472 409 ntBASIC17.68■□□□□ 0.42
TIMP1P01033 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.68■□□□□ 0.42
TIMP1P01033 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP1P01033 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP1P01033 AL391069.4-201ENST00000609583 481 ntBASIC17.68■□□□□ 0.42
TIMP1P01033 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TIMP1P01033 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TIMP1P01033 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.68■□□□□ 0.42
TIMP1P01033 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP1P01033 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP1P01033 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TIMP1P01033 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.67■□□□□ 0.42
TIMP1P01033 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
TIMP1P01033 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.67■□□□□ 0.42
TIMP1P01033 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.67■□□□□ 0.42
TIMP1P01033 RPL7P3-201ENST00000441388 714 ntBASIC17.67■□□□□ 0.42
TIMP1P01033 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.67■□□□□ 0.42
TIMP1P01033 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.67■□□□□ 0.42
TIMP1P01033 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 AC036164.1-201ENST00000570544 333 ntBASIC17.67■□□□□ 0.42
TIMP1P01033 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.67■□□□□ 0.42
TIMP1P01033 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TIMP1P01033 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TIMP1P01033 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TIMP1P01033 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP1P01033 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms