Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRUB2O95900 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.36■□□□□ 0.37
TRUB2O95900 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.36■□□□□ 0.37
TRUB2O95900 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRUB2O95900 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.36■□□□□ 0.37
TRUB2O95900 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.36■□□□□ 0.37
TRUB2O95900 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
TRUB2O95900 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.36■□□□□ 0.37
TRUB2O95900 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRUB2O95900 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRUB2O95900 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRUB2O95900 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRUB2O95900 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.36■□□□□ 0.37
TRUB2O95900 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRUB2O95900 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.35■□□□□ 0.37
TRUB2O95900 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.35■□□□□ 0.37
TRUB2O95900 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.35■□□□□ 0.37
TRUB2O95900 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 AL161645.1-201ENST00000622716 1255 ntBASIC17.35■□□□□ 0.37
TRUB2O95900 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.35■□□□□ 0.37
TRUB2O95900 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRUB2O95900 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.35■□□□□ 0.37
TRUB2O95900 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.34■□□□□ 0.37
TRUB2O95900 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.34■□□□□ 0.37
TRUB2O95900 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRUB2O95900 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.34■□□□□ 0.37
TRUB2O95900 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.34■□□□□ 0.37
TRUB2O95900 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.34■□□□□ 0.37
TRUB2O95900 ACTG1P14-201ENST00000446382 1122 ntBASIC17.34■□□□□ 0.37
TRUB2O95900 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.34■□□□□ 0.37
TRUB2O95900 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.34■□□□□ 0.37
TRUB2O95900 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.34■□□□□ 0.37
TRUB2O95900 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRUB2O95900 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms