Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 SPDYE13P-201ENST00000445314 798 ntBASIC14.87□□□□□ -0.03
CDRT1O95170 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.87□□□□□ -0.03
CDRT1O95170 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 AC006449.6-201ENST00000612330 2296 ntBASIC14.87□□□□□ -0.03
CDRT1O95170 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.87□□□□□ -0.03
CDRT1O95170 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.87□□□□□ -0.03
CDRT1O95170 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDRT1O95170 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 KRT8P10-201ENST00000450021 1447 ntBASIC14.86□□□□□ -0.03
CDRT1O95170 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CDRT1O95170 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.86□□□□□ -0.03
CDRT1O95170 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.86□□□□□ -0.03
CDRT1O95170 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 GUSBP12-201ENST00000513727 720 ntBASIC14.86□□□□□ -0.03
CDRT1O95170 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.86□□□□□ -0.03
CDRT1O95170 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.86□□□□□ -0.03
CDRT1O95170 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDRT1O95170 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDRT1O95170 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CDRT1O95170 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CDRT1O95170 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDRT1O95170 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.85□□□□□ -0.03
CDRT1O95170 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.85□□□□□ -0.03
CDRT1O95170 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 AC083849.1-201ENST00000615227 514 ntBASIC14.85□□□□□ -0.03
CDRT1O95170 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 PPT1-215ENST00000641471 2368 ntBASIC14.85□□□□□ -0.03
CDRT1O95170 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.85□□□□□ -0.03
CDRT1O95170 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 AL161772.1-201ENST00000610494 4412 ntBASIC14.85□□□□□ -0.03
CDRT1O95170 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDRT1O95170 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.85□□□□□ -0.03
CDRT1O95170 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CDRT1O95170 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDRT1O95170 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms