Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
USH2AO75445 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 FAM86LP-201ENST00000478302 853 ntBASIC7.26□□□□□ -1.25
USH2AO75445 AC078819.1-201ENST00000547454 765 ntBASIC7.26□□□□□ -1.25
USH2AO75445 AC012085.1-201ENST00000548270 765 ntBASIC7.26□□□□□ -1.25
USH2AO75445 AC025279.2-201ENST00000569730 653 ntBASIC7.26□□□□□ -1.25
USH2AO75445 RN7SL574P-201ENST00000581512 297 ntBASIC7.26□□□□□ -1.25
USH2AO75445 NDUFV2P1-201ENST00000596415 907 ntBASIC7.26□□□□□ -1.25
USH2AO75445 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
USH2AO75445 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 RN7SL596P-201ENST00000582123 288 ntBASIC7.26□□□□□ -1.25
USH2AO75445 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 AC025181.2-201ENST00000606994 802 ntBASIC7.26□□□□□ -1.25
USH2AO75445 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
USH2AO75445 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
USH2AO75445 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC7.26□□□□□ -1.25
USH2AO75445 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 AC124283.3-201ENST00000570869 594 ntBASIC7.26□□□□□ -1.25
USH2AO75445 GNRHR2-203ENST00000581100 1187 ntBASIC7.26□□□□□ -1.25
USH2AO75445 AC061975.2-201ENST00000581722 295 ntBASIC7.26□□□□□ -1.25
USH2AO75445 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 CDK7-214ENST00000626796 358 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
USH2AO75445 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
USH2AO75445 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 GCK-202ENST00000345378 2421 ntTSL 2 BASIC7.26□□□□□ -1.25
USH2AO75445 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USH2AO75445 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 AC016694.1-201ENST00000434179 700 ntBASIC7.25□□□□□ -1.25
USH2AO75445 NME4-207ENST00000450036 985 ntTSL 3 BASIC7.25□□□□□ -1.25
USH2AO75445 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
USH2AO75445 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC7.25□□□□□ -1.25
USH2AO75445 CU633904.3-201ENST00000624042 1029 ntBASIC7.25□□□□□ -1.25
USH2AO75445 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms