Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF40O75150 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF40O75150 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RNF40O75150 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RNF40O75150 SPDYE21P-201ENST00000413323 827 ntBASIC17.99■□□□□ 0.47
RNF40O75150 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.99■□□□□ 0.47
RNF40O75150 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 AC136632.2-201ENST00000512891 861 ntBASIC17.99■□□□□ 0.47
RNF40O75150 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF40O75150 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.99■□□□□ 0.47
RNF40O75150 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF40O75150 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RNF40O75150 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF40O75150 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF40O75150 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF40O75150 AL365203.3-201ENST00000609742 2057 ntBASIC17.99■□□□□ 0.47
RNF40O75150 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF40O75150 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 SIGLEC16-201ENST00000599858 1437 ntBASIC17.98■□□□□ 0.47
RNF40O75150 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF40O75150 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF40O75150 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF40O75150 HMGN1P19-201ENST00000436976 333 ntBASIC17.98■□□□□ 0.47
RNF40O75150 PRYP5-201ENST00000451909 266 ntBASIC17.98■□□□□ 0.47
RNF40O75150 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF40O75150 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF40O75150 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 MTDHP5-201ENST00000598980 586 ntBASIC17.98■□□□□ 0.47
RNF40O75150 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 AC116407.2-201ENST00000613639 860 ntBASIC17.98■□□□□ 0.47
RNF40O75150 AC073592.5-201ENST00000624854 528 ntBASIC17.98■□□□□ 0.47
RNF40O75150 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF40O75150 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF40O75150 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF40O75150 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RNF40O75150 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF40O75150 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
RNF40O75150 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF40O75150 AL355385.1-201ENST00000606123 409 ntBASIC17.97■□□□□ 0.47
RNF40O75150 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF40O75150 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RNF40O75150 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RNF40O75150 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF40O75150 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms