Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 PCDH8P1-201ENST00000428983 2773 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 AL671277.1-201ENST00000429656 993 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.86■□□□□ 0.13
LCMT2O60294 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.86■□□□□ 0.13
LCMT2O60294 AC092865.5-201ENST00000545435 363 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 AC005829.1-201ENST00000570002 483 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.86■□□□□ 0.13
LCMT2O60294 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.86■□□□□ 0.13
LCMT2O60294 AL161645.1-201ENST00000622716 1255 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 AC092364.2-201ENST00000596710 2692 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 UPF3AP3-201ENST00000420996 769 ntBASIC15.85■□□□□ 0.13
LCMT2O60294 GPX1P2-201ENST00000429271 606 ntBASIC15.85■□□□□ 0.13
LCMT2O60294 MKNK2P1-201ENST00000437526 628 ntBASIC15.85■□□□□ 0.13
LCMT2O60294 DNAJB3-201ENST00000446806 729 ntBASIC15.85■□□□□ 0.13
LCMT2O60294 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.85■□□□□ 0.13
LCMT2O60294 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
LCMT2O60294 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LCMT2O60294 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
LCMT2O60294 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.85■□□□□ 0.13
LCMT2O60294 WASH6P-202ENST00000359512 1437 ntBASIC15.85■□□□□ 0.13
LCMT2O60294 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LCMT2O60294 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.84■□□□□ 0.13
LCMT2O60294 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.84■□□□□ 0.13
LCMT2O60294 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LCMT2O60294 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LCMT2O60294 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LCMT2O60294 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LCMT2O60294 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LCMT2O60294 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 PCDHB19P-201ENST00000570871 2371 ntBASIC15.84■□□□□ 0.13
LCMT2O60294 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
LCMT2O60294 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCMT2O60294 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.84■□□□□ 0.13
LCMT2O60294 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms