Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
NDUFA1O15239 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 AL138831.2-201ENST00000606564 490 ntBASIC11.42□□□□□ -0.58
NDUFA1O15239 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.42□□□□□ -0.58
NDUFA1O15239 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.42□□□□□ -0.58
NDUFA1O15239 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 AC003669.1-201ENST00000334569 611 ntBASIC11.41□□□□□ -0.58
NDUFA1O15239 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.41□□□□□ -0.58
NDUFA1O15239 RN7SL606P-201ENST00000472779 293 ntBASIC11.41□□□□□ -0.58
NDUFA1O15239 KRT8P26-201ENST00000534154 1276 ntBASIC11.41□□□□□ -0.58
NDUFA1O15239 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.41□□□□□ -0.58
NDUFA1O15239 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
NDUFA1O15239 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 STK25P1-201ENST00000585406 838 ntBASIC11.41□□□□□ -0.58
NDUFA1O15239 AC011498.5-201ENST00000592027 486 ntBASIC11.41□□□□□ -0.58
NDUFA1O15239 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
NDUFA1O15239 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NDUFA1O15239 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
NDUFA1O15239 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NDUFA1O15239 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.41□□□□□ -0.58
NDUFA1O15239 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFA1O15239 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 AL135999.2-201ENST00000622438 1686 ntBASIC11.4□□□□□ -0.58
NDUFA1O15239 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 FAM45BP-202ENST00000592932 1624 ntBASIC11.4□□□□□ -0.58
NDUFA1O15239 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms