Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.1■□□□□ 0.33
TRANK1O15050 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
TRANK1O15050 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRANK1O15050 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
TRANK1O15050 CNN2P8-201ENST00000421872 913 ntBASIC17.1■□□□□ 0.33
TRANK1O15050 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.1■□□□□ 0.33
TRANK1O15050 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
TRANK1O15050 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.1■□□□□ 0.33
TRANK1O15050 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 AC244669.2-201ENST00000612320 853 ntBASIC17.1■□□□□ 0.33
TRANK1O15050 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.1■□□□□ 0.33
TRANK1O15050 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRANK1O15050 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRANK1O15050 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
TRANK1O15050 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRANK1O15050 RPS2P36-201ENST00000456516 831 ntBASIC17.1■□□□□ 0.33
TRANK1O15050 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.1■□□□□ 0.33
TRANK1O15050 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.1■□□□□ 0.33
TRANK1O15050 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.1■□□□□ 0.33
TRANK1O15050 MIR4722-201ENST00000578292 60 ntBASIC17.1■□□□□ 0.33
TRANK1O15050 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRANK1O15050 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRANK1O15050 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.09■□□□□ 0.33
TRANK1O15050 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 YBX1P6-201ENST00000442962 1002 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 EEF1DP4-201ENST00000446006 880 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.09■□□□□ 0.33
TRANK1O15050 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.09■□□□□ 0.33
TRANK1O15050 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
TRANK1O15050 AL365330.1-201ENST00000607459 531 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 AC005695.3-201ENST00000614522 232 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.09■□□□□ 0.33
TRANK1O15050 AC015967.2-201ENST00000624092 234 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 AC006435.4-201ENST00000625037 234 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 AL356737.1-201ENST00000634391 234 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
TRANK1O15050 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 PTP4A1P2-201ENST00000546033 454 ntBASIC17.09■□□□□ 0.33
TRANK1O15050 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRANK1O15050 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.09■□□□□ 0.33
TRANK1O15050 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRANK1O15050 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRANK1O15050 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
TRANK1O15050 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRANK1O15050 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.08■□□□□ 0.33
TRANK1O15050 RPL13P2-201ENST00000440687 659 ntBASIC17.08■□□□□ 0.33
TRANK1O15050 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.08■□□□□ 0.33
TRANK1O15050 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.08■□□□□ 0.33
TRANK1O15050 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.08■□□□□ 0.33
TRANK1O15050 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRANK1O15050 AL138688.1-201ENST00000624851 1594 ntBASIC17.08■□□□□ 0.33
TRANK1O15050 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.08■□□□□ 0.33
TRANK1O15050 AL512652.2-201ENST00000625156 1716 ntBASIC17.08■□□□□ 0.33
TRANK1O15050 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.08■□□□□ 0.33
TRANK1O15050 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.08■□□□□ 0.32
TRANK1O15050 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.08■□□□□ 0.32
TRANK1O15050 AC133539.2-201ENST00000604757 467 ntBASIC17.08■□□□□ 0.32
TRANK1O15050 LINC01115-203ENST00000606068 577 ntBASIC17.08■□□□□ 0.32
TRANK1O15050 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
TRANK1O15050 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRANK1O15050 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms