Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SLC25A6P4-201ENST00000586535 553 ntBASIC15.76■□□□□ 0.11
UPK1AO00322 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.76■□□□□ 0.11
UPK1AO00322 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.76■□□□□ 0.11
UPK1AO00322 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.76■□□□□ 0.11
UPK1AO00322 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.76■□□□□ 0.11
UPK1AO00322 AC010491.1-201ENST00000563101 2797 ntBASIC15.76■□□□□ 0.11
UPK1AO00322 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.76■□□□□ 0.11
UPK1AO00322 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
UPK1AO00322 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
UPK1AO00322 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
UPK1AO00322 AC009078.2-202ENST00000463353 338 ntBASIC15.75■□□□□ 0.11
UPK1AO00322 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.75■□□□□ 0.11
UPK1AO00322 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1AO00322 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1AO00322 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1AO00322 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 AC129492.6-201ENST00000611383 1305 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
UPK1AO00322 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
UPK1AO00322 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.74■□□□□ 0.11
UPK1AO00322 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1AO00322 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 AC108073.2-201ENST00000464002 357 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.74■□□□□ 0.11
UPK1AO00322 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1AO00322 AL662844.1-201ENST00000546340 181 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.74■□□□□ 0.11
UPK1AO00322 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1AO00322 AP001005.1-201ENST00000571755 1248 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 MIR4492-201ENST00000581627 80 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1AO00322 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
UPK1AO00322 AC004790.2-201ENST00000623588 572 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 AC116407.3-201ENST00000623905 1129 ntBASIC15.74■□□□□ 0.11
UPK1AO00322 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.74■□□□□ 0.11
UPK1AO00322 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms