Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC022211.2-201ENST00000585075 2527 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AC105020.1-201ENST00000435356 2205 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 KRT18P32-201ENST00000424695 1287 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 FAM86GP-201ENST00000448322 971 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AC011467.4-201ENST00000594891 528 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 LINC02084-201ENST00000606069 1096 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AC009093.7-201ENST00000623853 1223 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 AP001350.2-201ENST00000625104 1094 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 PRORSD1P-202ENST00000563365 2154 ntBASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA3F8WFD2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AC087641.1-201ENST00000557561 1021 ntBASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AC091167.2-201ENST00000579581 588 ntBASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 SLC22A20-204ENST00000530038 1673 ntBASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA3F8WFD2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 AC131009.4-201ENST00000624048 1740 ntBASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms