Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 AC087641.1-201ENST00000557561 1021 ntBASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV9S1A1TA0A576 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AC103702.1-201ENST00000548801 2630 ntBASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 CDC14C-201ENST00000428251 1719 ntBASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AP005117.1-202ENST00000581724 1908 ntBASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 LINC02447-202ENST00000501888 2146 ntBASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AL121772.3-201ENST00000610840 674 ntBASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV9S1A1TA0A576 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AC112504.1-201ENST00000623415 1841 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms