Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 YBX1P2-201ENST00000489612 999 ntBASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 AC010654.1-201ENST00000615722 808 ntBASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 HYMAI.1-201ENST00000620949 238 ntBASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 GPAA1P2-202ENST00000606848 1787 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC004817.3-201ENST00000602957 2129 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 LINC00982-205ENST00000420957 435 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC246785.2-201ENST00000432512 513 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC112907.2-201ENST00000448639 330 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 ATP5G1P1-201ENST00000448724 379 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 KRT18P38-201ENST00000449496 1282 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 MIR4492-201ENST00000581627 80 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC090616.6-201ENST00000582640 721 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AC139887.4-201ENST00000607877 719 ntBASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRDV1A0A1B0GX56 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms