Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV5A0A0B4J1U4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV5A0A0B4J1U4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
TRGV5A0A0B4J1U4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.83□□□□□ -0.03
TRGV5A0A0B4J1U4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV5A0A0B4J1U4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TRGV5A0A0B4J1U4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 FAM220BP-201ENST00000377689 816 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 AL353705.2-201ENST00000428243 662 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 AL512638.1-201ENST00000457493 794 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 AL390754.1-201ENST00000619088 582 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 GPAA1P2-202ENST00000606848 1787 ntBASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV5A0A0B4J1U4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC006538.1-201ENST00000567905 1585 ntBASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 HLA-J-202ENST00000469281 1241 ntBASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC097493.3-201ENST00000509725 367 ntBASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 RNA5SP410-201ENST00000516285 106 ntBASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC007967.4-201ENST00000614700 386 ntBASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 AL603756.1-201ENST00000606511 2163 ntBASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV5A0A0B4J1U4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms