Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 SNX33P1-201ENST00000592116 1762 ntBASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 FAM210CP-201ENST00000445714 574 ntBASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 PAWRP1-201ENST00000451083 565 ntBASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 NKAPP1-205ENST00000585790 367 ntBASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL139424.1-201ENST00000607572 797 ntBASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL139288.1-201ENST00000623748 933 ntBASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-7A0A0A0MS04 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 RBM17P3-201ENST00000417687 1192 ntBASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC138894.3-201ENST00000603787 634 ntBASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL671710.1-201ENST00000610245 2349 ntBASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-7A0A0A0MS04 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-7A0A0A0MS04 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms