Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 KRT18P2-201ENST00000447938 1258 ntBASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 FAM197Y3-203ENST00000618346 717 ntBASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 AC124947.2-201ENST00000547118 1133 ntBASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 AC019129.2-201ENST00000609837 1235 ntBASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 AC006504.4-201ENST00000592118 1568 ntBASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.02■□□□□ 0.8
DDX49Q9Y6V7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DDX49Q9Y6V7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
DDX49Q9Y6V7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DDX49Q9Y6V7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX49Q9Y6V7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.02■□□□□ 0.79
DDX49Q9Y6V7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 ELK2BP-201ENST00000415014 1224 ntBASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 AC092183.1-201ENST00000469884 875 ntBASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX49Q9Y6V7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms