Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 AL096865.1-201ENST00000606796 927 ntBASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 AC105339.1-204ENST00000636249 355 ntBASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 SNX33P1-201ENST00000592116 1762 ntBASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 FAM185BP-201ENST00000443595 716 ntBASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 AC239800.4-201ENST00000603712 296 ntBASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB1Q9Y5F3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 AC092171.3-201ENST00000610122 2651 ntBASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 AC109322.1-201ENST00000524499 1264 ntBASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 AC068137.2-201ENST00000605408 478 ntBASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB1Q9Y5F3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB1Q9Y5F3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms