Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 AL441883.1-201ENST00000566170 1045 ntBASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 AL138831.2-201ENST00000606564 490 ntBASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 AL139011.1-202ENST00000642063 584 ntBASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 AC008550.1-201ENST00000511500 884 ntBASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 TNRC18P2-201ENST00000417666 2714 ntBASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PRAL-201ENST00000624952 3286 ntBASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 KRT17P2-201ENST00000300992 1314 ntBASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RCL1Q9Y2P8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 AC006058.4-201ENST00000624016 1670 ntBASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 AC007326.2-201ENST00000624224 7579 ntBASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms