Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC011676.5-201ENST00000624864 2660 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 ADH5P3-201ENST00000433842 1137 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 HLA-J-203ENST00000494367 1087 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 AC092364.2-202ENST00000597012 1073 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 AC099522.2-201ENST00000607001 744 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 AC106886.4-201ENST00000623557 2502 ntBASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 AC105020.1-201ENST00000435356 2205 ntBASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA1Q9UND3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 KRT8P48-201ENST00000515599 1220 ntBASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 AC109322.1-201ENST00000524499 1264 ntBASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA1Q9UND3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 HMGA1P7-201ENST00000406908 502 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 TFAMP1-201ENST00000412727 736 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 AL627223.1-201ENST00000416693 442 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 FAM8A3P-201ENST00000427218 844 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 AL592309.1-201ENST00000443127 649 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms