Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 BCAR1-209ENST00000546196 1340 ntBASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AC025580.3-201ENST00000617932 1424 ntBASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AC005915.1-201ENST00000624912 2018 ntBASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AL139011.1-202ENST00000642063 584 ntBASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 AL645728.1-201ENST00000366221 2101 ntBASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 AC079328.2-201ENST00000561241 3354 ntBASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PPARGC1AQ9UBK2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 AL391256.1-201ENST00000443260 1855 ntBASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PPARGC1AQ9UBK2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 HMGA1P7-201ENST00000406908 502 ntBASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 PDPK2P-202ENST00000562415 1191 ntBASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 CYP2A7P1-201ENST00000595391 815 ntBASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
PPARGC1AQ9UBK2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms