Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PHRF1Q9P1Y6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 AL603756.1-201ENST00000606511 2163 ntBASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 PCGF3-213ENST00000620529 1899 ntBASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 AC068587.3-201ENST00000526613 355 ntBASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 AL365330.1-201ENST00000607459 531 ntBASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHRF1Q9P1Y6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 AC108725.1-201ENST00000495472 409 ntBASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 GNRHR2-203ENST00000581100 1187 ntBASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PHRF1Q9P1Y6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 AL583810.1-201ENST00000553344 1045 ntBASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 AC141586.5-201ENST00000624546 2050 ntBASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 INTS4P2-202ENST00000614726 2019 ntBASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.74■■□□□ 1.07
PHRF1Q9P1Y6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms