Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 AC142381.1-201ENST00000426099 345 ntBASIC17.18■□□□□ 0.34
HPS4Q9NQG7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.18■□□□□ 0.34
HPS4Q9NQG7 AC092580.3-201ENST00000430932 139 ntBASIC17.18■□□□□ 0.34
HPS4Q9NQG7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 MIR4453-201ENST00000584019 89 ntBASIC17.18■□□□□ 0.34
HPS4Q9NQG7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 AC080080.1-201ENST00000625121 2420 ntBASIC17.18■□□□□ 0.34
HPS4Q9NQG7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPS4Q9NQG7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AL021920.2-201ENST00000624828 1351 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC015922.1-201ENST00000421102 1152 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC190387.1-201ENST00000551683 408 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AF228730.6-201ENST00000641497 218 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC084121.3-201ENST00000641716 218 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 AC105233.6-201ENST00000642093 218 ntBASIC17.17■□□□□ 0.34
HPS4Q9NQG7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HPS4Q9NQG7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 AC108860.2-201ENST00000562760 2183 ntBASIC17.16■□□□□ 0.34
HPS4Q9NQG7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 TERF1P3-201ENST00000505638 1227 ntBASIC17.16■□□□□ 0.34
HPS4Q9NQG7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.16■□□□□ 0.34
HPS4Q9NQG7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms