Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 PPT1-215ENST00000641471 2368 ntBASIC19.73■□□□□ 0.75
RTN4Q9NQC3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AC041040.2-201ENST00000622926 2899 ntBASIC19.72■□□□□ 0.75
RTN4Q9NQC3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AC010491.1-201ENST00000563101 2797 ntBASIC19.72■□□□□ 0.75
RTN4Q9NQC3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AC010653.2-201ENST00000623505 997 ntBASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 AC005252.3-201ENST00000623855 2258 ntBASIC19.72■□□□□ 0.75
RTN4Q9NQC3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4Q9NQC3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 AC022532.1-201ENST00000624563 1728 ntBASIC19.71■□□□□ 0.75
RTN4Q9NQC3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.71■□□□□ 0.75
RTN4Q9NQC3 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms